miRBase entry: cja-mir-548h

Stem-loop cja-mir-548h


Accession
MI0032136
Description
Callithrix jacchus cja-mir-548h precursor miRNA


Sequence

ugcacguccuuguauuagguugaugcaaaagcaagugaguuuuucgcaauuacacuucuaauugCAAAAACCACAAUUUCUUUUGCaccaaccuaauacuugauugca
((((.(((...(((((((((((.((((((((...(((.((((((.(((((((......)))))))))))))))).....)))))))).)))))))))))..)))))))

Structure
    c   cuu           a        --caa   a      c       ca 
ugca guc   guauuagguug ugcaaaag     gug guuuuu gcaauua  c
|||| |||   ||||||||||| ||||||||     ||| |||||| |||||||   
acgu uag   cauaauccaac aCGUUUUC     CAC CAAAAA Cguuaau  u
    -   -uu           c        UUUAA   -      -       cu 


Annotation confidence Not enough data
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Genome context
chr20: 34004562-34004669 [+]

Database links

Mature cja-miR-548h

Accession MIMAT0039600
Description Callithrix jacchus cja-miR-548h mature miRNA
Sequence 65 - CAAAAACCACAAUUUCUUUUGC - 86
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857