miRBase entry: cja-mir-548j

Stem-loop cja-mir-548j


Accession
MI0032138
Description
Callithrix jacchus cja-mir-548j precursor miRNA


Sequence

auuaguuauuagguuggugcaaaaguaauuguguguuugcaauuaguaauauuaauggCAAAAAUCUCAAUUACUUUUGCagcaaccuaauaacuagu
((((((((((((((((.((((((((((((((....(((((.((((((...)))))).))))).....)))))))))))))).))))))))))))))))

Structure
                g              -ugug     a      a 
auuaguuauuagguug ugcaaaaguaauug     uuugc auuagu  
|||||||||||||||| ||||||||||||||     ||||| |||||| a
ugaucaauaauccaac aCGUUUUCAUUAAC     AAACg uaauua  
                g              UCUAA     g      u 


Annotation confidence Not enough data
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Genome context
chr9: 48418992-48419089 [+]

Database links

Mature cja-miR-548j

Accession MIMAT0039602
Description Callithrix jacchus cja-miR-548j mature miRNA
Sequence 59 - CAAAAAUCUCAAUUACUUUUGC - 80
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857