miRBase entry: cja-mir-875

Stem-loop cja-mir-875


Accession
MI0032144
Description
Callithrix jacchus cja-mir-875 precursor miRNA


Sequence

guuuagugguacUAUACCUCAGUUUUAUCAGGUGuucuuaaaaucaCCUGGAAAUACUGAGGUUGUGucucacugaac
(((((((((.((...((((((((.((.(((((((..........))))))).)).))))))))...)).)))))))))

Structure
         u  UAU        U  A       uucu 
guuuagugg ac   ACCUCAGU UU UCAGGUG    u
||||||||| ||   |||||||| || |||||||     
caagucacu uG   UGGAGUCA AA GGUCCac    a
         c  UGU        U  A       uaaa 


Annotation confidence Not enough data
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Genome context
chr16: 95025077-95025154 [+]

Database links

Mature cja-miR-875-5p

Accession MIMAT0039607
Description Callithrix jacchus cja-miR-875-5p mature miRNA
Sequence 13 - UAUACCUCAGUUUUAUCAGGUG - 34
Evidence experimental
Illumina [1]

Mature cja-miR-875-3p

Accession MIMAT0039608
Description Callithrix jacchus cja-miR-875-3p mature miRNA
Sequence 47 - CCUGGAAAUACUGAGGUUGUG - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857