Stem-loop cja-mir-302c

Accession

MI0032151

Description

Callithrix jacchus cja-mir-302c precursor miRNA

Sequence

ggguuccccuuugcuuuaacauggggguaccugcugugugaaacaaaagUAAGUGCUUCCAUGUUUCAGUGGaggugucucc
(((..(.((((((((..(((((((((((((.((((.(((...)))..)))).)))))))))))))..)))))))).)..)))

Structure

   uu c        uu             c    -g   g 
ggg  c ccuuugcu  aacauggggguac ugcu  ugu  
|||  | ||||||||  ||||||||||||| ||||  ||| a
ccu  g ggaGGUGA  UUGUACCUUCGUG AUga  aca  
   cu u        CU             A    aa   a 

Annotation confidence Not enough data

Genome context

chr3: 80984547-80984628 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from cja-mir-302c

Mature cja-miR-302c

• Accession: MIMAT0039615
• Description: Callithrix jacchus cja-miR-302c mature miRNA
• Sequence: 50 - UAAGUGCUUCCAUGUUUCAGUGG - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857