miRBase entry: cja-mir-586

Stem-loop cja-mir-586


Accession
MI0032156
Description
Callithrix jacchus cja-mir-586 precursor miRNA


Sequence

ugcuuauuaaaagauauggguuaaaacgauUAUGCAUUGUAUUUUUAGGUCucaauauguguggggccuaaaaaugcaaugcauaaugguuuuacacucuuuaucuucauauuuaagua
((((((....((((((.((((((((((.((((((((((((((((((((((((((.......)))))))))))))))))))))))))).)))))).))))..))))))......))))))

Structure
      --uuaa      -u    -      g                          au 
ugcuua      aagaua  gggu uaaaac auUAUGCAUUGUAUUUUUAGGUCuca  a
||||||      ||||||  |||| |||||| ||||||||||||||||||||||||||  u
augaau      uucuau  cuca auuuug uaauacguaacguaaaaauccggggu  g
      uuauac      uu    c      g                          gu 


Annotation confidence Not enough data
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Genome context
chr4: 46576162-46576280 [-]

Database links

Mature cja-miR-586

Accession MIMAT0039621
Description Callithrix jacchus cja-miR-586 mature miRNA
Sequence 31 - UAUGCAUUGUAUUUUUAGGUC - 51
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857