miRBase entry: cja-mir-103b-2

Stem-loop cja-mir-103b-2


Accession
MI0032157
Description
Callithrix jacchus cja-mir-103b-2 precursor miRNA


Sequence

agggcagcccauucuugguucuuUCAUAGCCCUGUACAAUGCUGCUugaccugaaugcuacaaggcagcacuguaaagaagcugaaagcacaaagacgcagcucu
(((((.((....((((.((.((((((..((.((.((((.((((((((...............)))))))).)))).))..)))))))).)).)))).)).)))))

Structure
     a  ccau    g  u      UA  -C  G    A        gaccug 
agggc gc    ucuu gu cuuUCA  GC  CU UACA UGCUGCUu      a
||||| ||    |||| || ||||||  ||  || |||| ||||||||      a
ucucg cg    agaa ca gaaagu  cg  ga augu acgacgga      u
     a  ---c    a  c      --  aa  a    c        acaucg 


Annotation confidence Not enough data
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Genome context
chr5: 9746822-9746926 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cja-mir-103b-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cja-miR-103b

Accession MIMAT0039622
Description Callithrix jacchus cja-miR-103b mature miRNA
Sequence 24 - UCAUAGCCCUGUACAAUGCUGCU - 46
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857