miRBase entry: cja-mir-1282

Stem-loop cja-mir-1282


Accession
MI0032159
Description
Callithrix jacchus cja-mir-1282 precursor miRNA


Sequence

cuuggguuccuccuucuucUCGUUUGCCUUUUUCUGCUUcugcugcaugaucuccgagucccuggggguagagaugauggggcacugggagguaccagagggcaaaaaggacaagacacagggggaugaagg
(((....(((((((((((((..((((((((((..((((((((((.(((.(((((..(.(((...))).).))))).))).)))....)))))))..))))))))))..)))..)))...)))))))..))).

Structure
-   gggu       ---   --   CG          UC       ----   g   g     cg g   c 
 cuu    uccuccu   ucu  ucU  UUUGCCUUUU  UGCUUcu    gcu cau aucuc  a ucc  
 |||    |||||||   |||  |||  ||||||||||  |||||||    ||| ||| |||||  | ||| u
 gaa    aggggga   aga  agg  aaacgggaga  auggagg    cgg gua uagag  u ggg  
g   --gu       cac   ac   aa          cc       guca   g   g     -a g   g 


Annotation confidence Not enough data
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Genome context
chrX: 50039611-50039742 [-]

Database links

Mature cja-miR-1282

Accession MIMAT0039623
Description Callithrix jacchus cja-miR-1282 mature miRNA
Sequence 20 - UCGUUUGCCUUUUUCUGCUU - 39
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857