miRBase entry: cja-mir-548y-1

Stem-loop cja-mir-548y-1


Accession
MI0032163
Description
Callithrix jacchus cja-mir-548y-1 precursor miRNA


Sequence

gguuggugUGAAAGUAAUUGCGGUUUUUGCuguaaaaagcaauggcgaaaaccacaauuacuuuuggaccaacc
(((((((.((((((((((((.((((((((((((........)))))))))))).)))))))))))).)))))))

Structure
       g            C            aaa 
gguuggu UGAAAGUAAUUG GGUUUUUGCugu   a
||||||| |||||||||||| ||||||||||||    
ccaacca guuuucauuaac ccaaaagcggua   a
       g            a            acg 


Annotation confidence Not enough data
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Genome context
chr14: 87622077-87622150 [-]

Database links

Mature cja-miR-548y

Accession MIMAT0039626
Description Callithrix jacchus cja-miR-548y mature miRNA
Sequence 9 - UGAAAGUAAUUGCGGUUUUUGC - 30
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857