Stem-loop cja-mir-612

Accession

MI0032179

Description

Callithrix jacchus cja-mir-612 precursor miRNA

Sequence

cucucugagccccugcuucucaucuggacccugCUGGGGAGGGCUUCUGAGCUCCUuggugcuggcagcaggggcuccaggggcccucccuccauggcagccaagacaggacaggacucucagacgag
(((((((((..((((.((((..(((((...((((((((((((((((((((((.(((((.((....)).)))))))).))))))))))))))....))))))).))).))))))))...)))))).)))

Structure

   -      -cc    c    ca   -  acc     ----              -   U     g  c 
cuc ucugag   ccug uucu  ucu gg   cugCU    GGGGAGGGCUUCUG AGC CCUug ug u
||| ||||||   |||| ||||  ||| ||   |||||    |||||||||||||| ||| ||||| ||  
gag agacuc   ggac agga  aga cc   gacgg    ucccucccggggac ucg gggac ac g
   c      uca    -    -c   a  ---     uacc              c   -     g  g 

Annotation confidence Not enough data

Genome context

chr11: 121113436-121113563 [+]

Mature cja-miR-612

• Accession: MIMAT0039642
• Description: Callithrix jacchus cja-miR-612 mature miRNA
• Sequence: 34 - CUGGGGAGGGCUUCUGAGCUCCU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857