Stem-loop cja-mir-545

Accession

MI0032181

Description

Callithrix jacchus cja-mir-545 precursor miRNA

Sequence

uccagagcccagccuggcacauuaguaggccucaguaaauguuuauuagaugaauaaaugaaugacucaUCAACAAACAUUUAUUGUGUGCcugcuaaagugaucuccacaggcucugga
(((((((((......(((((.((((((((((.((((((((((((.((.(((((.............))))))).)))))))))))).).))))))))).))).))......)))))))))

Structure

         cagccu  -   a         - u            a  a     auaaa 
uccagagcc      gg cac uuaguaggc c caguaaauguuu uu gauga     u
|||||||||      || ||| ||||||||| | |||||||||||| || |||||     g
aggucucgg      cu gug aaucgucCG G GUUAUUUACAAA AA CUacu     a
         acaccu  a   a         U U            C  -     cagua 

Annotation confidence Not enough data

Genome context

chrX: 66016475-66016594 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-545

Mature cja-miR-545

• Accession: MIMAT0039644
• Description: Callithrix jacchus cja-miR-545 mature miRNA
• Sequence: 70 - UCAACAAACAUUUAUUGUGUGC - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857