Stem-loop cja-mir-498

Accession

MI0032200

Description

Callithrix jacchus cja-mir-498 precursor miRNA

Sequence

gcccccaacccuccuuggggagugaugcucagucugugauuucaagcugggggugcuuuucugugacuggugaAAAGCACCUGCAGGGCUUGAACCccacaguuugagagcaagcaucuaaggagguugauggc
(((..(((((.((((((((..((..(((((...(((((..(((((((((.(((((((((((..........))))))))))).)..))))))))...))))).....))))).)).)))))))))))))..)))

Structure

   cc     c        ga  ga     --agu     -au        -- g           ugug 
gcc  caacc uccuuggg  gu  ugcuc     cugug   uucaagcu  g gggugcuuuuc    a
|||  ||||| ||||||||  ||  |||||     |||||   ||||||||  | |||||||||||     
cgg  guugg aggaaucu  cg  acgag     gacac   AAGUUCGG  C UCCACGAAAag    c
   ua     -        -a  -a     aguuu     cCC        GA G           uggu 

Annotation confidence Not enough data

Genome context

chr22: 44879572-44879705 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from cja-mir-498

Mature cja-miR-498

• Accession: MIMAT0039662
• Description: Callithrix jacchus cja-miR-498 mature miRNA
• Sequence: 74 - AAAGCACCUGCAGGGCUUGAACC - 96
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857