Stem-loop cja-mir-513g

Accession

MI0032208

Description

Callithrix jacchus cja-mir-513g precursor miRNA

Sequence

gggaugccacauucagccauccagcgugcagugcccuucacaagguggugucauucauguggacuaaaaugugAAUGCCACCUUUUUGAGAAGAguaauguacagcauguacugcgcaggugguguccc
((((((((((.....((....(((((((((.(((.((((.(((((.((((.(((((((((........))))))))).)))).))))).)))).))).))))).)).))....))....))))))))))

Structure

          auuca  cauc  -  -     g   c    a     u    u         gga 
gggaugccac     gc    ca gc gugca ugc cuuc caagg ggug cauucaugu   c
||||||||||     ||    || || ||||| ||| |||| ||||| |||| |||||||||    
cccuguggug     cg    gu cg caugu aug GAAG GUUUU CCAC GUAAgugua   u
          -gacg  ucau  a  a     a   A    A     U    C         aaa 

Annotation confidence Not enough data

Genome context

chrX: 134385253-134385381 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-mir-513g

Mature cja-miR-513g-3p

• Accession: MIMAT0039667
• Description: Callithrix jacchus cja-miR-513g-3p mature miRNA
• Sequence: 74 - AAUGCCACCUUUUUGAGAAGA - 94
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857