miRBase entry: cja-mir-513f-1

Stem-loop cja-mir-513f-1


Accession
MI0032211
Description
Callithrix jacchus cja-mir-513f-1 precursor miRNA


Sequence

gugcagugcccuuacaagaaggugccauucaugugaacuaauauaUGAAUGUCGCCUUCUUGAGAAGAguaauguac
(((((.(((.(((.((((((((((.((((((((((......)))))))))).))))))))))..))).))).)))))

Structure
     g   c   -a          c          aa 
gugca ugc cuu  caagaaggug cauucaugug  c
||||| ||| |||  |||||||||| ||||||||||   
caugu aug GAA  GUUCUUCCGC GUAAGUauau  u
     a   A   GA          U          aa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrX: 134379256-134379332 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cja-mir-513f-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cja-miR-513f-3p

Accession MIMAT0039670
Description Callithrix jacchus cja-miR-513f-3p mature miRNA
Sequence 46 - UGAAUGUCGCCUUCUUGAGAAGA - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857