Stem-loop cja-mir-9922

Accession

MI0032229

Description

Callithrix jacchus cja-mir-9922 precursor miRNA

Sequence

ggcccuuucuaccccagugccugaauugccagggcccccugcgacagcggugccugaguugccagggcccucugugACACCAGUGCCACAGUUGUCGCaggaauugccagggcuuccagcaccauccaugggguuuggagcc
(((((.....((((((((((..(((..(((..(((..(((((((((((.(((((((.((..(((((....)))).)..))))).).))).)))))))))))....)))..))))))..))))......))))))..)).)))

Structure

   -  uuucu      ------    cu   uu   ag   --cc           g   - -   a  ug -    g 
ggc cc     acccca      gugc  gaa  gcc  ggc    ccugcgacagc gug c cug gu  c cagg c
||| ||     ||||||      ||||  |||  |||  |||    ||||||||||| ||| | ||| ||  | ||||  
ccg gg     uggggu      cacg  cuu  cgg  ccg    ggaCGCUGUUG CAC G GAC CA  g gucu c
   a  ---uu      accuac    ac   --   ga   uuaa           A   C U   -  CA u    c 

Annotation confidence Not enough data

Genome context

chr21: 37563288-37563429 [+]

Mature cja-miR-9922

• Accession: MIMAT0039685
• Description: Callithrix jacchus cja-miR-9922 mature miRNA
• Sequence: 77 - ACACCAGUGCCACAGUUGUCGC - 98
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857