Stem-loop cja-mir-9927

Accession

MI0032237

Description

Callithrix jacchus cja-mir-9927 precursor miRNA

Sequence

caccccaggcccacgcucugcaguccgccgcccucuucuggacaccgagguggaAGAGAGCUGCGAACUGAGAAGCcgucuucugggcagggug
(((((...(((((((((((.((((.(((.((.((((((....(((....))))))))).)).))).)))))).)).))).....)))).)))))

Structure

     cag    -----   -  -  g    c   c  c      ugga   c 
caccc   gccc     acg cu cu cagu cgc gc cucuuc    cac g
|||||   ||||     ||| || || |||| ||| || ||||||    |||  
guggg   cggg     ugc GA GA GUCA GCG CG GAGAag    gug a
     --a    ucuuc   C  A  -    A   U  A      ----   g 

Annotation confidence Not enough data

Genome context

chr8: 25112341-25112434 [+]

Mature cja-miR-9927

• Accession: MIMAT0039693
• Description: Callithrix jacchus cja-miR-9927 mature miRNA
• Sequence: 55 - AGAGAGCUGCGAACUGAGAAGC - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857