Stem-loop cja-mir-6529

Accession

MI0032264

Description

Callithrix jacchus cja-mir-6529 precursor miRNA

Sequence

uagaugagaaaaccuguucucuuGAGAGAUCAGAGGCGCAGAGUgcgucaaugucaaugaagccugugccuuuuaccucuuuaagagcgcacgguuucauucugcuucua
((((.((((((((((((.((((((((((...((((((((((...((.(((.......))).))))))))))))...))).))))))).))).))))...)))).).))))

Structure

    u -    ---    -   u       -   AUC          AGU  g   au 
uaga g agaa   aacc ugu cucuuGA GAG   AGAGGCGCAG   gc uca  g
|||| | ||||   |||| ||| ||||||| |||   ||||||||||   || |||  u
aucu c ucuu   uugg acg gagaauu cuc   uuuccguguc   cg agu  c
    u g    acu    c   c       u   cau          ---  a   aa 

Annotation confidence Not enough data

Genome context

chr15: 76853268-76853377 [+]

Mature cja-miR-6529

• Accession: MIMAT0039719
• Description: Callithrix jacchus cja-miR-6529 mature miRNA
• Sequence: 24 - GAGAGAUCAGAGGCGCAGAGU - 44
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596