miRBase entry: cja-mir-9955

Stem-loop cja-mir-9955


Accession
MI0032276
Description
Callithrix jacchus cja-mir-9955 precursor miRNA


Sequence

cugUAUGUUGUUCAGCAUUUCCCUCaacuaaaguaugaauuuuaagcaauuaggugauguaauaaauguguguaauagaauccauauguuuaaaagaggaaguggugacgguauuaaccuacag
(((((.((((.(((.(((((((.((...(((((((((.((((((.(((..((.((..........)).)))))..)))))).))))).))))...))))))))).)))......)))).)))))

Structure
     U    -----U   G       C  aac    -     a      -a   au  g  gaug 
cugUA GUUG      UCA CAUUUCC UC   uaaa guaug auuuua  gca  ua gu    u
||||| ||||      ||| ||||||| ||   |||| ||||| ||||||  |||  || ||     
gacau caau      agu gugaagg ag   auuu uauac uaagau  ugu  gu ua    a
     c    uauggc   g       -  aaa    g     c      aa   --  g  aaua 


Annotation confidence Not enough data
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Genome context
chr2: 112906577-112906700 [-]

Database links

Mature cja-miR-9955

Accession MIMAT0039730
Description Callithrix jacchus cja-miR-9955 mature miRNA
Sequence 4 - UAUGUUGUUCAGCAUUUCCCUC - 25
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857