miRBase entry: cja-mir-9959

Stem-loop cja-mir-9959


Accession
MI0032281
Description
Callithrix jacchus cja-mir-9959 precursor miRNA


Sequence

cuccacagcuccuUCAGGUAAGCUCUGUGCCACUGuucuucccugcauaacggugguaaggggccuaccugggugaucuggggg
((((.(((.((.((((((((.(((((.((((((((((...........)))))))))).))))).)))))))).)).)))))))

Structure
    a   c  c        A     G          cuuc 
cucc cag uc uUCAGGUA GCUCU UGCCACUGuu    c
|||| ||| || |||||||| ||||| ||||||||||    c
gggg guc ag ggguccau cgggg augguggcaa    u
    -   u  u        c     a          uacg 


Annotation confidence Not enough data
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Genome context
chr14: 31764477-31764560 [+]

Database links

Mature cja-miR-9959

Accession MIMAT0039734
Description Callithrix jacchus cja-miR-9959 mature miRNA
Sequence 14 - UCAGGUAAGCUCUGUGCCACUG - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857