miRBase entry: cja-mir-9973

Stem-loop cja-mir-9973


Accession
MI0032297
Description
Callithrix jacchus cja-mir-9973 precursor miRNA


Sequence

gagcacugugguaccacagcagUGGCUCUGGAUCAGAACUCUGCucuccuaggggcuagaugcagagaccugguacccaaggccucuguucugaugccauucuc
.......((((((.((.(((((.((((.((((((((..(((((((((((....))..))).))))))..)))))..))).)))).))))).)).))))))....

Structure
gagcacu      c  c     U    C   --     AA      -   --  u 
       guggua ca agcag GGCU UGG  AUCAG  CUCUGC ucu  cc a
       |||||| || ||||| |||| |||  |||||  |||||| |||  ||  
       uaccgu gu uuguc ccgg acc  ugguc  gagacg aga  gg g
---cucu      a  c     u    a   ca     ca      u   uc  g 


Annotation confidence Not enough data
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Genome context
chr1: 117034774-117034877 [-]

Database links

Mature cja-miR-9973

Accession MIMAT0039749
Description Callithrix jacchus cja-miR-9973 mature miRNA
Sequence 23 - UGGCUCUGGAUCAGAACUCUGC - 44
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857