miRBase entry: cja-mir-9974

Stem-loop cja-mir-9974


Accession
MI0032298
Description
Callithrix jacchus cja-mir-9974 precursor miRNA


Sequence

uaaaagguggaaauaguagcuacuggggacugcuugggcugcaguacccaacuaguacugaaaaacuUGGGUACUGUAGCCUGAGUAGUaccuauagggcugaaaaacuaccuuuug
((((((((((......(((((....(((((((((((((((((((((((((...(((........))))))))))))))))))))))))).)))....))))).....))))))))))

Structure
          aaauag     acug   -                      acu   acu 
uaaaaggugg      uagcu    ggg acugcuugggcugcaguaccca   agu   g
||||||||||      |||||    ||| ||||||||||||||||||||||   |||    
guuuuccauc      gucgg    ucc UGAUGAGUCCGAUGUCAUGGGU   uca   a
          -aaaaa     gaua   a                      ---   aaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr13: 41314575-41314691 [+]

Database links

Mature cja-miR-9974

Accession MIMAT0039750
Description Callithrix jacchus cja-miR-9974 mature miRNA
Sequence 68 - UGGGUACUGUAGCCUGAGUAGU - 89
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25038751
    The common marmoset genome provides insight into primate biology and evolution
    "Marmoset Genome Sequencing and Analysis Consortium"
    "Nat Genet (2014) 46:850-857