Stem-loop cja-mir-9978

Accession

MI0032303

Description

Callithrix jacchus cja-mir-9978 precursor miRNA

Sequence

ggaagauugaagacUUGAAAGAGGCACCAAAAAAUGgguaaggccggggcagccacgauaccucccaccccaggcccagcccguuuaauuugaaugcaccugccaucucuugucuucu
(((((((..((((..((..((..(((.((((((((((((..((((((((..................)))).))))..))))))))..))))..)))..))..))..)))))))))))

Structure

       ug    cU  AA  AG   -C    --        aa    -    cagccacg 
ggaagau  aaga  UG  AG  GCA  CAAA  AAAUGggu  ggcc gggg        a
|||||||  ||||  ||  ||  |||  ||||  ||||||||  |||| ||||         
ucuucug  uucu  ac  uc  cgu  guuu  uuugcccg  ccgg cccc        u
       --    cu  cg  ca   aa    aa        ac    a    acccucca 

Annotation confidence Not enough data

Genome context

chr22: 6408067-6408184 [-]

Mature cja-miR-9978

• Accession: MIMAT0039754
• Description: Callithrix jacchus cja-miR-9978 mature miRNA
• Sequence: 15 - UUGAAAGAGGCACCAAAAAAUG - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857