Stem-loop cja-mir-487b

Accession

MI0032312

Description

Callithrix jacchus cja-mir-487b precursor miRNA

Sequence

ggcuuuccuuuccgugcuaaccuuugguacuuggagagugguuaucccuguccuguucguuuugcucaugucgAAUCGUACAGGGUCAUCCACUUuuucaguaucaagagcgcagacucuggagcc
((((((....((.(((((....(((((((((.(((((((((....((((((.(.(((((............))))).).))))))....))))))))).)))))))))))))).))....))))))

Structure

      ccuu  c     aacc         u         uuau      c u     uuuug 
ggcuuu    uc gugcu    uuugguacu ggagagugg    cccugu c guucg     c
||||||    || |||||    ||||||||| |||||||||    |||||| | |||||      
ccgagg    ag cgcga    gaacuauga uuuUUCACC    GGGACA G UAAgc     u
      ucuc  a     ----         c         UACU      U C     uguac 

Annotation confidence Not enough data

Genome context

chr10: 126963808-126963933 [+]

Clustered miRNAs

16 other miRNAs are < 10 kb from cja-mir-487b

Mature cja-miR-487b

• Accession: MIMAT0039762
• Description: Callithrix jacchus cja-miR-487b mature miRNA
• Sequence: 74 - AAUCGUACAGGGUCAUCCACUU - 95
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 25038751
   The common marmoset genome provides insight into primate biology and evolution
   "Marmoset Genome Sequencing and Analysis Consortium"
   "Nat Genet (2014) 46:850-857


2. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596