miRBase entry: pal-mir-206

Stem-loop pal-mir-206


Accession
MI0032334
Description
Pteropus alecto pal-mir-206 precursor miRNA


Sequence

ACAUGCUUCUUUAUAUCCCCAUacggauuacuuugcuaUGGAAUGUAAGGAAGUGUGUGG
((((((((((((((((..(((((((((....)))).))))).))))))))))))))))..

Structure
--                CC     -    u 
  ACAUGCUUCUUUAUAU  CCAUa cgga u
  ||||||||||||||||  ||||| ||||  
  UGUGUGAAGGAAUGUA  GGUau guuu a
GG                -A     c    c 


Annotation confidence Not enough data
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Genome context
KB031158.1: 33912881-33912940 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from pal-mir-206
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pal-miR-206-5p

Accession MIMAT0039797
Description Pteropus alecto pal-miR-206-5p mature miRNA
Sequence 1 - ACAUGCUUCUUUAUAUCCCCAU - 22
Evidence experimental
Illumina [1]

Mature pal-miR-206-3p

Accession MIMAT0039798
Description Pteropus alecto pal-miR-206-3p mature miRNA
Sequence 39 - UGGAAUGUAAGGAAGUGUGUGG - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682