miRBase entry: pal-mir-148a

Stem-loop pal-mir-148a


Accession
MI0032345
Description
Pteropus alecto pal-mir-148a precursor miRNA


Sequence

AAAGUUCUGAGACACUCCGAcucugaauaugauagaagUCAGUGCACUACAGAACUUUGU
(((((((((((.((((..(((((((.......))).))))))))..)).)))))))))..

Structure
--         -  -A    CC    -   aa 
  AAAGUUCUG AG  CACU  GAcu cug  u
  ||||||||| ||  ||||  |||| |||  a
  UUUCAAGAC UC  GUGA  CUga gau  u
UG         A  AC    --    a   ag 


Annotation confidence Not enough data
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Genome context
KB030660.1: 18509079-18509138 [-]

Database links

Mature pal-miR-148a-5p

Accession MIMAT0039818
Description Pteropus alecto pal-miR-148a-5p mature miRNA
Sequence 1 - AAAGUUCUGAGACACUCCGA - 20
Evidence experimental
Illumina [1]

Mature pal-miR-148a-3p

Accession MIMAT0039819
Description Pteropus alecto pal-miR-148a-3p mature miRNA
Sequence 39 - UCAGUGCACUACAGAACUUUGU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682