miRBase entry: pal-mir-30e

Stem-loop pal-mir-30e


Accession
MI0032352
Description
Pteropus alecto pal-mir-30e precursor miRNA


Sequence

UGUAAACAUCCUUGACUGGAAGCUguaagguguucagaggagCUUUCAGUCGGAUGUUUACAGC
(((((((((((..(((((((((((.(...(....)...).))))))))))))))))))))))..

Structure
--           UU           g aag u 
  UGUAAACAUCC  GACUGGAAGCU u   g g
  |||||||||||  ||||||||||| |   |  
  ACAUUUGUAGG  CUGACUUUCga g   c u
CG           --           g aga u 


Annotation confidence Not enough data
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Genome context
KB030256.1: 850362-850425 [+]

Database links

Mature pal-miR-30e-5p

Accession MIMAT0039832
Description Pteropus alecto pal-miR-30e-5p mature miRNA
Sequence 1 - UGUAAACAUCCUUGACUGGAAGCU - 24
Evidence experimental
Illumina [1]

Mature pal-miR-30e-3p

Accession MIMAT0039833
Description Pteropus alecto pal-miR-30e-3p mature miRNA
Sequence 43 - CUUUCAGUCGGAUGUUUACAGC - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682