Stem-loop pal-mir-23a

Accession

MI0032366

Description

Pteropus alecto pal-mir-23a precursor miRNA

Sequence

GGGGUUCCUGGGGAUGGGAUUUGcugccugucacaaAUCACAUUGCCAGGGAUUUCCA
(((((((((((.((((.((((((.((.....)))))))).)))).)))))))))))..

Structure

--           G    G      c  c 
  GGGGUUCCUGG GAUG GAUUUG ug c
  ||||||||||| |||| |||||| || u
  CUUUAGGGACC UUAC CUAaac ac g
AC           G    A      -  u 

Annotation confidence Not enough data

Genome context

KB030998.1: 907716-907773 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-23a

Mature pal-miR-23a-5p

• Accession: MIMAT0039856
• Description: Pteropus alecto pal-miR-23a-5p mature miRNA
• Sequence: 1 - GGGGUUCCUGGGGAUGGGAUUUG - 23
• Evidence: experimental ; Illumina [1]

Mature pal-miR-23a-3p

• Accession: MIMAT0039857
• Description: Pteropus alecto pal-miR-23a-3p mature miRNA
• Sequence: 37 - AUCACAUUGCCAGGGAUUUCCA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682