miRBase entry: pal-mir-22

Stem-loop pal-mir-22


Accession
MI0032368
Description
Pteropus alecto pal-mir-22 precursor miRNA


Sequence

AGUUCUUCAGUGGCAAGCUUUAuguccugacccagcuaAAGCUGCCAGUUGAAGAACUGU
(((((((((((((((.((((((.((.........))))))))))))).))))))))))..

Structure
--          -     A      u  ccu 
  AGUUCUUCAG UGGCA GCUUUA gu   g
  |||||||||| ||||| |||||| ||   a
  UCAAGAAGUU ACCGU CGAAau cg   c
UG          G     -      -  acc 


Annotation confidence Not enough data
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Genome context
KB031150.1: 22310778-22310837 [-]

Database links

Mature pal-miR-22-5p

Accession MIMAT0039860
Description Pteropus alecto pal-miR-22-5p mature miRNA
Sequence 1 - AGUUCUUCAGUGGCAAGCUUUA - 22
Evidence experimental
Illumina [1]

Mature pal-miR-22-3p

Accession MIMAT0039861
Description Pteropus alecto pal-miR-22-3p mature miRNA
Sequence 39 - AAGCUGCCAGUUGAAGAACUGU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682