miRBase entry: pal-mir-146b

Stem-loop pal-mir-146b


Accession
MI0032405
Description
Pteropus alecto pal-mir-146b precursor miRNA


Sequence

UGAGAACUGAAUUCCAUAGGCUGUgaccucuagcaaauGCCCUAGGGACUCAGUUCCAGUG
((.(((((((.((((...((((((........)))...)))...)))).)))))))))...

Structure
---  A       A    AUA   ---   gac 
   UG GAACUGA UUCC   GGC   UGU   c
   || ||||||| ||||   |||   |||    
   AC CUUGACU AGGG   CCG   acg   u
GUG  -       C    AUC   uaa   auc 


Annotation confidence Not enough data
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Genome context
KB031059.1: 12687934-12687994 [-]

Database links

Mature pal-miR-146b-5p

Accession MIMAT0039929
Description Pteropus alecto pal-miR-146b-5p mature miRNA
Sequence 1 - UGAGAACUGAAUUCCAUAGGCUGU - 24
Evidence experimental
Illumina [1]

Mature pal-miR-146b-3p

Accession MIMAT0039930
Description Pteropus alecto pal-miR-146b-3p mature miRNA
Sequence 39 - GCCCUAGGGACUCAGUUCCAGUG - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682