miRBase entry: pal-mir-664b

Stem-loop pal-mir-664b


Accession
MI0032448
Description
Pteropus alecto pal-mir-664b precursor miRNA


Sequence

CAGGCUAGGGGACAUGACUGGAUagaaagcaucacucugUUCGUUCAUCUCCCAGCCUACA
.(((((..((((.((((.((((((((.........)))))))).)))).)))))))))...

Structure
--C     AG    C    C        aag 
   AGGCU  GGGA AUGA UGGAUaga   c
   |||||  |||| |||| ||||||||   a
   UCCGA  CCCU UACU GCUUgucu   u
ACA     --    C    U        cac 


Annotation confidence Not enough data
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Genome context
KB031016.1: 12594-12654 [+]

Database links

Mature pal-miR-664b-5p

Accession MIMAT0040013
Description Pteropus alecto pal-miR-664b-5p mature miRNA
Sequence 1 - CAGGCUAGGGGACAUGACUGGAU - 23
Evidence experimental
Illumina [1]

Mature pal-miR-664b-3p

Accession MIMAT0040014
Description Pteropus alecto pal-miR-664b-3p mature miRNA
Sequence 40 - UUCGUUCAUCUCCCAGCCUACA - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682