miRBase entry: pal-mir-885

Stem-loop pal-mir-885


Accession
MI0032450
Description
Pteropus alecto pal-mir-885 precursor miRNA

Literature search
1 open access papers mention pal-mir-885
(1 sentences)

Sequence

UCCAUUACACUACCCUGCCUCUucucugugagAGGCAGUGGGGUGUAGUGGAG
(((((((((((.(((((((((((......))))))))).))))))))))))).

Structure
-           A  -         cu 
 UCCAUUACACU CC CUGCCUCUu  c
 ||||||||||| || |||||||||   
 AGGUGAUGUGG GG GACGGAgag  u
G           -  U         ug 


Annotation confidence Not enough data
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Genome context
KB030947.1: 29827704-29827756 [-]

Database links

Mature pal-miR-885-5p

Accession MIMAT0040017
Description Pteropus alecto pal-miR-885-5p mature miRNA
Sequence 1 - UCCAUUACACUACCCUGCCUCU - 22
Evidence experimental
Illumina [1]

Mature pal-miR-885-3p

Accession MIMAT0040018
Description Pteropus alecto pal-miR-885-3p mature miRNA
Sequence 33 - AGGCAGUGGGGUGUAGUGGAG - 53
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682