miRBase entry: pal-mir-490

Stem-loop pal-mir-490


Accession
MI0032458
Description
Pteropus alecto pal-mir-490 precursor miRNA


Sequence

CCAUGGAUCUCCAGGUGGGUcacguuuugagauacacCAACCUGGAGGACUCCAUGCUGU
.(((((((((((((((.(((...((........))))).)))))))))..))))))....

Structure
---C      --         G   cac  uuu 
    CAUGGA  UCUCCAGGU GGU   gu   g
    ||||||  ||||||||| |||   ||    
    GUACCU  GGAGGUCCA Cca   ca   a
UGUC      CA         A   ---  uag 


Annotation confidence Not enough data
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Genome context
KB030581.1: 4337974-4338033 [-]

Database links

Mature pal-miR-490-5p

Accession MIMAT0040031
Description Pteropus alecto pal-miR-490-5p mature miRNA
Sequence 1 - CCAUGGAUCUCCAGGUGGGU - 20
Evidence experimental
Illumina [1]

Mature pal-miR-490-3p

Accession MIMAT0040032
Description Pteropus alecto pal-miR-490-3p mature miRNA
Sequence 38 - CAACCUGGAGGACUCCAUGCUGU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682