Stem-loop sequence pal-mir-338

AccessionMI0032460 (change log)
DescriptionPteropus alecto miR-338 stem-loop
Literature search

1 open access papers mention pal-mir-338
(1 sentences)

Stem-loop 
   --     c   -         -   ga  a 
5'   aacaa auc cuggugcug agu  ug c
     ||||| ||| ||||||||| |||  || a
3'   uuguu uag gacuacgac uca  gc c
   ag     u   u         c   ac  a
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (ASM32557v1; GCA_000325575.1) Overlapping transcripts
KB030661.1: 1301099-1301157 [+]
intergenic
Database links

Mature sequence pal-miR-338-5p

Accession MIMAT0040035
Sequence

1 -  

aacaacauccuggugcugagu

 - 21

Get sequence
Evidence experimental; Illumina [1]

Mature sequence pal-miR-338-3p

Accession MIMAT0040036
Sequence

37 -  

uccagcaucagugauuuuguuga

 - 59

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:25128405 "Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing" Cowled C, Stewart CR, Likic VA, Friedlander MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF BMC Genomics. 15:682(2014).