Stem-loop pal-mir-301a

Accession

MI0032465

Description

Pteropus alecto pal-mir-301a precursor miRNA

Sequence

GCUCUGACUUUAUUGCACUACUguacuuuacagcuagCAGUGCAAUAGUAUUGUCAAAGCAU
(((.((((.((((((((((.((((........)).)).))))))))))....)))).)))..

Structure

--   C    ---U          A  -  acu 
  GCU UGAC    UUAUUGCACU CU gu   u
  ||| ||||    |||||||||| || ||    
  CGA ACUG    GAUAACGUGA ga cg   u
UA   A    UUAU          C  u  aca 

Annotation confidence Not enough data

Genome context

KB031150.1: 11796142-11796203 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-301a

Mature pal-miR-301a-5p

• Accession: MIMAT0040045
• Description: Pteropus alecto pal-miR-301a-5p mature miRNA
• Sequence: 1 - GCUCUGACUUUAUUGCACUACU - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-301a-3p

• Accession: MIMAT0040046
• Description: Pteropus alecto pal-miR-301a-3p mature miRNA
• Sequence: 38 - CAGUGCAAUAGUAUUGUCAAAGCAU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682