miRBase entry: pal-mir-8908e

Stem-loop pal-mir-8908e


Accession
MI0032474
Description
Pteropus alecto pal-mir-8908e precursor miRNA


Sequence

UUAUUCAGAAAGGAGCAGAUUgcuuauacugcauguAAUUUGCACCGUUCUGAGUAGA
((((((((((.((.(((((((((...........))))))))).)).)))))))))).

Structure
-          A  A         uuau 
 UUAUUCAGAA GG GCAGAUUgc    a
 |||||||||| || |||||||||    c
 GAUGAGUCUU CC CGUUUAAug    u
A          G  A         uacg 


Annotation confidence Not enough data
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Genome context
KB030657.1: 3681-3738 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from pal-mir-8908e
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pal-miR-8908e-5p

Accession MIMAT0040063
Description Pteropus alecto pal-miR-8908e-5p mature miRNA
Sequence 1 - UUAUUCAGAAAGGAGCAGAUU - 21
Evidence experimental
Illumina [1]

Mature pal-miR-8908e-3p

Accession MIMAT0040064
Description Pteropus alecto pal-miR-8908e-3p mature miRNA
Sequence 37 - AAUUUGCACCGUUCUGAGUAGA - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682