miRBase entry: pal-mir-330

Stem-loop pal-mir-330


Accession
MI0032491
Description
Pteropus alecto pal-mir-330 precursor miRNA


Sequence

UCUCUGGGCCUGUGUCUUAGGCUcugcaagaugaaccgaGCAAAGCACACGGCCUGCAGAGA
((((((((((((((.(((..((((.............)))).))))))).))))..))))))

Structure
      --    -    U   AG    ugcaa 
UCUCUG  GGCC UGUG CUU  GCUc     g
||||||  |||| |||| |||  ||||     a
AGAGAC  CCGG ACAC GAA  CGag     u
      GU    C    -   -A    ccaag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KB030659.1: 1498137-1498198 [-]

Database links

Mature pal-miR-330-5p

Accession MIMAT0040095
Description Pteropus alecto pal-miR-330-5p mature miRNA
Sequence 1 - UCUCUGGGCCUGUGUCUUAGGCU - 23
Evidence experimental
Illumina [1]

Mature pal-miR-330-3p

Accession MIMAT0040096
Description Pteropus alecto pal-miR-330-3p mature miRNA
Sequence 40 - GCAAAGCACACGGCCUGCAGAGA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682