Stem-loop pal-mir-141

Accession

MI0032492

Description

Pteropus alecto pal-mir-141 precursor miRNA

Sequence

AUCUUCCAGUACAGUGUUGGAuggucuaauugugaagcuccUAACACUGUCUGGUAAAGAUGG
(((((((((.(((((((((((...((.......))...))).))))))))))))..)))))..

Structure

--     --    U        -   ugg  ua 
  AUCUU  CCAG ACAGUGUU GGA   uc  a
  |||||  |||| |||||||| |||   ||  u
  UAGAA  GGUC UGUCACAA ccu   ag  u
GG     AU    -        U   cga  ug 

Annotation confidence Not enough data

Genome context

KB030754.1: 13553208-13553270 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pal-mir-141

Mature pal-miR-141-5p

• Accession: MIMAT0040097
• Description: Pteropus alecto pal-miR-141-5p mature miRNA
• Sequence: 1 - AUCUUCCAGUACAGUGUUGGA - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-141-3p

• Accession: MIMAT0040098
• Description: Pteropus alecto pal-miR-141-3p mature miRNA
• Sequence: 42 - UAACACUGUCUGGUAAAGAUGG - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682