miRBase entry: pal-mir-8908a-1

Stem-loop pal-mir-8908a-1


Accession
MI0032495
Description
Pteropus alecto pal-mir-8908a-1 precursor miRNA


Sequence

UACUCAGAAGGGGCCAGGUUACuuagaaugaguguUGCCUGAGCCCUUCUGAGUAU
((((((((((((..(((((((((((...))))))..)))))..)))))))))))).

Structure
-            GC     --      g 
 UACUCAGAAGGG  CAGGU  UACuua  
 ||||||||||||  |||||  |||||| a
 AUGAGUCUUCCC  GUCCG  gugagu  
U            GA     Uu      a 


Annotation confidence Not enough data
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Genome context
KB031124.1: 6350-6405 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from pal-mir-8908a-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pal-miR-8908a-5p

Accession MIMAT0039987
Description Pteropus alecto pal-miR-8908a-5p mature miRNA
Sequence 1 - UACUCAGAAGGGGCCAGGUUAC - 22
Evidence experimental
Illumina [1]

Mature pal-miR-8908a-3p

Accession MIMAT0040103
Description Pteropus alecto pal-miR-8908a-3p mature miRNA
Sequence 36 - UGCCUGAGCCCUUCUGAGUAU - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682