Stem-loop pal-mir-1301

Accession

MI0032556

Description

Pteropus alecto pal-mir-1301 precursor miRNA

Sequence

GUCACUCUAGGCACCGCAGCAcugugcuggggaugUUGCAGCUGCCGGGAGUGAUUU
((((((((.(((((.((((((((.......)).)))))).).)))).))))))))..

Structure

--        A    - C      -  gu 
  GUCACUCU GGCA C GCAGCA cu  g
  |||||||| |||| | |||||| ||  c
  UAGUGAGG CCGU G CGUUgu gg  u
UU        G    C A      a  gg 

Annotation confidence Not enough data

Genome context

KB030580.1: 15008855-15008911 [-]

Mature pal-miR-1301-5p

• Accession: MIMAT0040216
• Description: Pteropus alecto pal-miR-1301-5p mature miRNA
• Sequence: 1 - GUCACUCUAGGCACCGCAGCA - 21
• Evidence: experimental ; Illumina [1]

Mature pal-miR-1301-3p

• Accession: MIMAT0040217
• Description: Pteropus alecto pal-miR-1301-3p mature miRNA
• Sequence: 36 - UUGCAGCUGCCGGGAGUGAUUU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682