miRBase entry: pal-mir-8908c

Stem-loop pal-mir-8908c


Accession
MI0032572
Description
Pteropus alecto pal-mir-8908c precursor miRNA


Sequence

UACUUAGAAAGGUGCAGAUUGCUuaaacuaaguguAAUUUGUGCCUUUCUGAGU
.(((((((((((((((((((((...........)))))))))))))))))))))

Structure
U                     Uuaa 
 ACUUAGAAAGGUGCAGAUUGC    a
 |||||||||||||||||||||    c
 UGAGUCUUUCCGUGUUUAAug    u
-                     ugaa 


Annotation confidence Not enough data
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Genome context
KB031124.1: 8454-8507 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from pal-mir-8908c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pal-miR-8908c-5p

Accession MIMAT0040247
Description Pteropus alecto pal-miR-8908c-5p mature miRNA
Sequence 1 - UACUUAGAAAGGUGCAGAUUGCU - 23
Evidence experimental
Illumina [1]

Mature pal-miR-8908c-3p

Accession MIMAT0040248
Description Pteropus alecto pal-miR-8908c-3p mature miRNA
Sequence 36 - AAUUUGUGCCUUUCUGAGU - 54
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682