miRBase entry: pal-mir-4646

Stem-loop pal-mir-4646


Accession
MI0032576
Description
Pteropus alecto pal-mir-4646 precursor miRNA


Sequence

ACUGGGAAGAGGAGCUGAGGUGCugugaagaaagcUCCUCACGUCUUCUCUCCCUUCC
...((((((((((..(((((.(((........))).)))))..)))))).))))....

Structure
-ACU    -      GC     U   gug 
    GGGA AGAGGA  UGAGG GCu   a
    |||| ||||||  ||||| |||    
    CCCU UCUUCU  ACUCC cga   a
CCUU    C      GC     U   aag 


Annotation confidence Not enough data
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Genome context
KB030277.1: 535328-535385 [+]

Database links

Mature pal-miR-4646-5p

Accession MIMAT0040255
Description Pteropus alecto pal-miR-4646-5p mature miRNA
Sequence 1 - ACUGGGAAGAGGAGCUGAGGUGC - 23
Evidence experimental
Illumina [1]

Mature pal-miR-4646-3p

Accession MIMAT0040256
Description Pteropus alecto pal-miR-4646-3p mature miRNA
Sequence 36 - UCCUCACGUCUUCUCUCCCUUCC - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682