miRBase entry: pal-mir-10000

Stem-loop pal-mir-10000


Accession
MI0032581
Description
Pteropus alecto pal-mir-10000 precursor miRNA


Sequence

ACAUCAAGACUAGGCAUACACUGcucaucacuccagcaGUGUAUGCUAGUCUUGACAUCU
...((((((((((.(((((((((((.........))))))))))))))))))))).....

Structure
--ACA          G           cau 
     UCAAGACUAG CAUACACUGcu   c
     |||||||||| |||||||||||   a
     AGUUCUGAUC GUAUGUGacga   c
UCUAC          -           ccu 


Annotation confidence Not enough data
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Genome context
KB030474.1: 8105416-8105475 [-]

Database links

Mature pal-miR-10000-5p

Accession MIMAT0040265
Description Pteropus alecto pal-miR-10000-5p mature miRNA
Sequence 1 - ACAUCAAGACUAGGCAUACACUG - 23
Evidence experimental
Illumina [1]

Mature pal-miR-10000-3p

Accession MIMAT0040266
Description Pteropus alecto pal-miR-10000-3p mature miRNA
Sequence 39 - GUGUAUGCUAGUCUUGACAUCU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682