miRBase entry: pal-mir-9993b

Stem-loop pal-mir-9993b


Accession
MI0032587
Description
Pteropus alecto pal-mir-9993b precursor miRNA


Sequence

UAGGUCUUAGGGAAAACUucccuccucccucuggggaguAUCUCGCUGGGGCCUCCA
.(((((((((.((..(((((((..........)))))))...)).)))))))))...

Structure
--U         G  -AA       uccu 
   AGGUCUUAG GA   ACUuccc    c
   ||||||||| ||   |||||||     
   UCCGGGGUC CU   ugagggg    c
ACC         G  CUA       ucuc 


Annotation confidence Not enough data
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Genome context
KB031080.1: 1240027-1240083 [+]

Database links

Mature pal-miR-9993b-5p

Accession MIMAT0040277
Description Pteropus alecto pal-miR-9993b-5p mature miRNA
Sequence 1 - UAGGUCUUAGGGAAAACU - 18
Evidence experimental
Illumina [1]

Mature pal-miR-9993b-3p

Accession MIMAT0040278
Description Pteropus alecto pal-miR-9993b-3p mature miRNA
Sequence 40 - AUCUCGCUGGGGCCUCCA - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682