Stem-loop pal-mir-9226

Accession

MI0032588

Description

Pteropus alecto pal-mir-9226 precursor miRNA

Sequence

UCAAGUCCCUGUUCGGGCGCCAcuugucggaaaccagccgaccaagucaaaccagGUACCUGAAUGGGGGAGCAGGG
.....((((((((((((.((((((((((((.......)))).))))).......))).)))))))))))).......

Structure

--UCAAG            C   -------     -    aa 
       UCCCUGUUCGGG GCC       Acuug ucgg  a
       |||||||||||| |||       ||||| ||||  c
       GGGGGUAAGUCC UGg       ugaac agcc  c
GGGACGA            A   accaaac     c    ga 

Annotation confidence Not enough data

Genome context

KB030581.1: 20531677-20531753 [-]

Mature pal-miR-9226-5p

• Accession: MIMAT0040279
• Description: Pteropus alecto pal-miR-9226-5p mature miRNA
• Sequence: 1 - UCAAGUCCCUGUUCGGGCGCCA - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-9226-3p

• Accession: MIMAT0040280
• Description: Pteropus alecto pal-miR-9226-3p mature miRNA
• Sequence: 56 - GUACCUGAAUGGGGGAGCAGGG - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682