miRBase entry: pal-mir-513

Stem-loop pal-mir-513


Accession
MI0032616
Description
Pteropus alecto pal-mir-513 precursor miRNA

Literature search
1 open access papers mention pal-mir-513
(2 sentences)

Sequence

UUCGCAAGAAGGUGUCAUUCAUguacacuaaaauauGAAUGGCGCCUUUUAGCGAAGA
(((((.((((((((((((((((((........)))))))))))))))))).)))))..

Structure
--     A                  aca 
  UUCGC AGAAGGUGUCAUUCAUgu   c
  ||||| ||||||||||||||||||    
  AAGCG UUUUCCGCGGUAAGuaua   u
AG     A                  aaa 


Annotation confidence Not enough data
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Genome context
KB030676.1: 1639365-1639422 [+]

Database links

Mature pal-miR-513-5p

Accession MIMAT0040331
Description Pteropus alecto pal-miR-513-5p mature miRNA
Sequence 1 - UUCGCAAGAAGGUGUCAUUCAU - 22
Evidence experimental
Illumina [1]

Mature pal-miR-513-3p

Accession MIMAT0040332
Description Pteropus alecto pal-miR-513-3p mature miRNA
Sequence 37 - GAAUGGCGCCUUUUAGCGAAGA - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682