Stem-loop pal-mir-513

Accession

MI0032616

Description

Pteropus alecto pal-mir-513 precursor miRNA

Literature search

1 open access papers mention pal-mir-513
(2 sentences)

Sequence

UUCGCAAGAAGGUGUCAUUCAUguacacuaaaauauGAAUGGCGCCUUUUAGCGAAGA
(((((.((((((((((((((((((........)))))))))))))))))).)))))..

Structure

--     A                  aca 
  UUCGC AGAAGGUGUCAUUCAUgu   c
  ||||| ||||||||||||||||||    
  AAGCG UUUUCCGCGGUAAGuaua   u
AG     A                  aaa 

Annotation confidence Not enough data

Genome context

KB030676.1: 1639365-1639422 [+]

Mature pal-miR-513-5p

• Accession: MIMAT0040331
• Description: Pteropus alecto pal-miR-513-5p mature miRNA
• Sequence: 1 - UUCGCAAGAAGGUGUCAUUCAU - 22
• Evidence: experimental ; Illumina [1]

Mature pal-miR-513-3p

• Accession: MIMAT0040332
• Description: Pteropus alecto pal-miR-513-3p mature miRNA
• Sequence: 37 - GAAUGGCGCCUUUUAGCGAAGA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25128405
   Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
   Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
   BMC Genomics (2014) 15:682