miRBase entry: pal-mir-876

Stem-loop pal-mir-876


Accession
MI0032619
Description
Pteropus alecto pal-mir-876 precursor miRNA


Sequence

GAUUUCUUUGUGAAUCACCAuaucuaagcuaauguggugGUGGUUUACAAAGUAAUUCA
((.((((((((((((((((((..(.........)..)))))))))))))))).)).)).

Structure
-  U  -                au uaa 
 GA UU CUUUGUGAAUCACCAu  c   g
 || || ||||||||||||||||  |   c
 CU AA GAAACAUUUGGUGgug  g   u
A  U  U                gu uaa 


Annotation confidence Not enough data
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Genome context
KB030713.1: 2731429-2731487 [+]

Database links

Mature pal-miR-876-5p

Accession MIMAT0040337
Description Pteropus alecto pal-miR-876-5p mature miRNA
Sequence 1 - GAUUUCUUUGUGAAUCACCA - 20
Evidence experimental
Illumina [1]

Mature pal-miR-876-3p

Accession MIMAT0040338
Description Pteropus alecto pal-miR-876-3p mature miRNA
Sequence 40 - GUGGUUUACAAAGUAAUUCA - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682