miRBase entry: pal-mir-9298

Stem-loop pal-mir-9298


Accession
MI0032622
Description
Pteropus alecto pal-mir-9298 precursor miRNA


Sequence

ACAGAUGAUGAACUUAUUGACGGgcggacagaggcugugcugcugauuGUCACGUUCUGAUUUGGCU
.(((((.(.((((....((((((((((((((...)))).)))))...))))).))))).)))))...

Structure
--A     G U    UUAU     ---     -    a 
   CAGAU A GAAC    UGACG   Ggcgg acag  
   ||||| | ||||    |||||   ||||| |||| g
   GUUUA U CUUG    ACUGu   ucguc uguc  
UCG     G -    ---C     uag     g    g 


Annotation confidence Not enough data
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Genome context
KB030944.1: 4845683-4845749 [+]

Database links

Mature pal-miR-9298-5p

Accession MIMAT0040343
Description Pteropus alecto pal-miR-9298-5p mature miRNA
Sequence 1 - ACAGAUGAUGAACUUAUUGACGG - 23
Evidence experimental
Illumina [1]

Mature pal-miR-9298-3p

Accession MIMAT0040344
Description Pteropus alecto pal-miR-9298-3p mature miRNA
Sequence 49 - GUCACGUUCUGAUUUGGCU - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682