miRBase entry: pal-mir-378e

Stem-loop pal-mir-378e


Accession
MI0032627
Description
Pteropus alecto pal-mir-378e precursor miRNA


Sequence

CCUGGCAGUCUUAGUCUUGUGAagagagcACUGGACUAGGAGUCAGAAA
.(((((..(((((((((.(((.......))).))))))))))))))...

Structure
--C     AG         U   Aa 
   CUGGC  UCUUAGUCU GUG  g
   |||||  ||||||||| |||  a
   GACUG  AGGAUCAGG CAc  g
AAA     --         U   ga 


Annotation confidence Not enough data
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Genome context
KB030474.1: 1756665-1756713 [-]

Database links

Mature pal-miR-378e-5p

Accession MIMAT0040353
Description Pteropus alecto pal-miR-378e-5p mature miRNA
Sequence 1 - CCUGGCAGUCUUAGUCUUGUGA - 22
Evidence experimental
Illumina [1]

Mature pal-miR-378e-3p

Accession MIMAT0040354
Description Pteropus alecto pal-miR-378e-3p mature miRNA
Sequence 30 - ACUGGACUAGGAGUCAGAAA - 49
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682