miRBase entry: pal-mir-3085

Stem-loop pal-mir-3085


Accession
MI0032633
Description
Pteropus alecto pal-mir-3085 precursor miRNA


Sequence

AGGUGCCAUUCUGAGGGCCAGGAGUuugauuauguaucacUCUGGCUGCUAUGGCCCCCUC
.((.(((((......((((((.(((..(((.....))))))))))))...)))))))....

Structure
---A  U     UCUGAG      G   uu   u 
    GG GCCAU      GGCCAG AGU  gau a
    || |||||      |||||| |||  ||| u
    CC CGGUA      UCGGUC Uca  cua g
CUCC  -     ---UCG      -   --   u 


Annotation confidence Not enough data
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Genome context
KB031155.1: 11070055-11070115 [+]

Database links

Mature pal-miR-3085-5p

Accession MIMAT0040365
Description Pteropus alecto pal-miR-3085-5p mature miRNA
Sequence 1 - AGGUGCCAUUCUGAGGGCCAGGAGU - 25
Evidence experimental
Illumina [1]

Mature pal-miR-3085-3p

Accession MIMAT0040366
Description Pteropus alecto pal-miR-3085-3p mature miRNA
Sequence 41 - UCUGGCUGCUAUGGCCCCCUC - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25128405
    Characterisation of novel microRNAs in the Black flying fox (Pteropus alecto) by deep sequencing
    Cowled C, Stewart CR, Likic VA, Friedländer MR, Tachedjian M, Jenkins KA, Tizard ML, Cottee P, Marsh GA, Zhou P, Baker ML, Bean AG, Wang LF
    BMC Genomics (2014) 15:682