miRBase entry: hpo-mir-233

Stem-loop hpo-mir-233


Accession
MI0032683
Description
Heligmosomoides polygyrus hpo-mir-233 precursor miRNA


Sequence

CUGUACAUGUCGUGCUUCAAUAccacgggugauaUUGAGCAACGAAUAUGUGCGGGA
((((((((((((((((.(((((.((....)).)))))))).))).))))))))))..

Structure
--          -   -   U     c  c 
  CUGUACAUGU CGU GCU CAAUA ca g
  |||||||||| ||| ||| ||||| ||  
  GGCGUGUAUA GCA CGA GUUau gu g
AG          A   A   -     a  g 


Annotation confidence Not enough data
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Genome context
HpolyGenome23022012_contig_59422: 2834-2890 [-]

Database links

Mature hpo-miR-233-5p

Accession MIMAT0040452
Description Heligmosomoides polygyrus hpo-miR-233-5p mature miRNA
Sequence 1 - CUGUACAUGUCGUGCUUCAAUA - 22
Evidence experimental
Illumina [1]

Mature hpo-miR-233-3p

Accession MIMAT0040453
Description Heligmosomoides polygyrus hpo-miR-233-3p mature miRNA
Sequence 35 - UUGAGCAACGAAUAUGUGCGGGA - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25421927
    Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
    Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
    Nat Commun (2014) 5:5488