Stem-loop hpo-mir-5908

Accession

MI0032685

Description

Heligmosomoides polygyrus hpo-mir-5908 precursor miRNA

Sequence

GGUGAUUGUGCACUGGUGAGGUacgaccgcgacUUCAUCAGGCCUCAGUCAUCCAC
((((((((.((.((((((((((.((....))))))))))))))..))))))))...

Structure

---        -U  A          a  a 
   GGUGAUUG  GC CUGGUGAGGU cg c
   ||||||||  || |||||||||| ||  
   CUACUGAC  CG GACUACUUca gc c
CAC        UC  -          -  g 

Annotation confidence Not enough data

Genome context

HpolyGenome23022012_contig_296779: 847-902 [+]

Mature hpo-miR-5908-5p

• Accession: MIMAT0040456
• Description: Heligmosomoides polygyrus hpo-miR-5908-5p mature miRNA
• Sequence: 1 - GGUGAUUGUGCACUGGUGAGGU - 22
• Evidence: experimental ; Illumina [1]

Mature hpo-miR-5908-3p

• Accession: MIMAT0040457
• Description: Heligmosomoides polygyrus hpo-miR-5908-3p mature miRNA
• Sequence: 34 - UUCAUCAGGCCUCAGUCAUCCAC - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25421927
   Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity
   Buck AH, Coakley G, Simbari F, McSorley HJ, Quintana JF, Le Bihan T, Kumar S, Abreu-Goodger C, Lear M, Harcus Y, Ceroni A, Babayan SA, Blaxter M, Ivens A, Maizels RM
   Nat Commun (2014) 5:5488